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IDProjectCategoryView StatusLast Update
0003657Slicer4Core: Base Codepublic2017-09-27 11:15
ReportermuratmagaAssigned Tofinetjul 
PrioritynormalSeveritymajorReproducibilityalways
Status assignedResolutionopen 
Product VersionSlicer 4.3.1 
Target VersionbacklogFixed in Version 
Summary0003657: Setting the unit to microns doesn't help transformation or the rendering of small objects
Description

load the sample volume (resolution is 11.93 microns)
turn on the volume rendering
Notice how far off the object is

ZOom in to have sufficient view of the emryo

Measure some sort of length (for example height from IS axis)
Notice the size of the default label in relation to the sample (this can be adjusted from the annotation tab)

Go to annotations tab

Modify the settings for the ruler.
Text scale 0.2 gives a reasonably sized text, but the format is in scientific convention which is not ideal (plus it is missing the mu).

Go to the lines tab, adjust the tick spacing to 1000microns notice the size of the ticks. At this point you can't adjust the width. Width field doesn't take a decimal).

Create a linear transform and move the volume to the transformed.
Try using the slider for translation. (Adjusting the min and max and letting the slider continuously move between those min/max range may resolve the problem)

The file is too big to upload please use the link below
https://www.dropbox.com/s/a8ie3eww7ssis2u/E12.5-3747-r7__rec.7z

I replicated this error on Windows 64 both the 4.3.1 stable and the build r23039

TagsNo tags attached.

Activities

nicole

nicole

2014-12-30 10:46

administrator   ~0012822

I'm going to take a look at this at the Winter Project Week for this project:
http://wiki.na-mic.org/Wiki/index.php/2015_Winter_Project_Week:SlicerMicroMacroScale
The sample data link has expired, could you point me to a new one?
Thanks!

Related Changesets

Import 2017-06-07 23:51:09: master 7a05d88d

2014-05-21 14:42:12

finetjul

Details Diff
BUG: Update qMRMLSliderWidget single step when range changes

The single step can depend on the range of the slider, update it when
needed.

Issues 0003657, 0003700
$ git shortlog 3aaa591..daaf705 --no-merges
Julien Finet (1):
Virtualize ctkRangeWidget and ctkSliderWidget public API

git-svn-id: http://svn.slicer.org/Slicer4/trunk@23224 3bd1e089-480b-0410-8dfb-8563597acbee
mod - Libs/MRML/Widgets/qMRMLSliderWidget.cxx Diff File
mod - Libs/MRML/Widgets/qMRMLSliderWidget.h Diff File
mod - SuperBuild/External_CTK.cmake Diff File

Issue History

Date Modified Username Field Change
2014-04-17 11:39 muratmaga New Issue
2014-04-17 11:39 muratmaga Status new => assigned
2014-04-17 11:39 muratmaga Assigned To => jcfr
2014-04-17 11:45 finetjul Assigned To jcfr => finetjul
2014-09-10 12:01 finetjul Target Version => Slicer 4.4.1
2014-12-30 10:46 nicole Note Added: 0012822
2015-09-09 08:28 jcfr Target Version Slicer 4.4.1 => Slicer 4.5.0-1
2015-11-02 12:01 jcfr Target Version Slicer 4.5.0-1 => Slicer 4.6.0
2016-10-12 03:56 jcfr Target Version Slicer 4.6.0 => Slicer 4.7.0
2017-06-10 08:51 finetjul Changeset attached => Slicer master 7a05d88d
2017-09-27 11:15 lassoan Target Version Slicer 4.7.0 => backlog