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IDProjectCategoryView StatusLast Update
0004675Slicer4Core: Base Codepublic2019-02-12 15:23
ReporterdfpaceAssigned Tojcfr 
PrioritynoneSeverityminorReproducibilityalways
Status assignedResolutionopen 
Product VersionSlicer 4.10.1 
Target VersionFixed in Version 
Summary0004675: Cannot load images that are symlinks
Description

Whoops - it turns out my symlinks were bad =) Symlinks work fine in Slicer.

Unfortunately I can't remove the issue report.


My setup frequently uses symlinks to images, e.g.,

/data/vision/polina/projects/cardiac/PediatricSegmentation/Subjects/SemiSupervised/multipleImages_3D_pat6_validate/vols/pat6-subvolume-normalized.nii.gz -> /data/vision/polina/projects/cardiac/PediatricSegmentation/Subjects/SemiSupervised/multipleImages_all/vols/pat6-subvolume-normalized.nii.gz

However, if I use
File -> Add Data -> Choose File(s) to add

and navigate to
/data/vision/polina/projects/cardiac/PediatricSegmentation/Subjects/SemiSupervised/multipleImages_3D_pat6_validate/vols/
I see nothing and cannot open the file.

File -> Add Data -> Choose Directory to add
similarly yields nothing.

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Issue History

Date Modified Username Field Change
2019-02-12 15:06 dfpace New Issue
2019-02-12 15:06 dfpace Status new => assigned
2019-02-12 15:06 dfpace Assigned To => jcfr
2019-02-12 15:23 dfpace Priority normal => none
2019-02-12 15:23 dfpace Description Updated View Revisions